Showing posts with label root rot. Show all posts
Showing posts with label root rot. Show all posts

Wednesday, August 24, 2011

Armillaria Root Rot in the Landscape: Attack of the "Humongous Fungus"

Armillaria Fruiting Bodies (NCSU PP Slide Collection)
Root rot is one of the most commonly diagnosed disease problems of woody plants in landscapes in North Carolina.  
Each year we see dozens of shrubs and trees that have one of the “big three” root rotting diseases: Phytophthora root rot, Thielaviopsis black root rot, or Armillaria root rot.  

This post will feature Armillaria root rot.  Be on the lookout in the upcoming weeks for posts on Phytophthora root rot and
Thielaviopsis black root rot!

Armillaria root rot is caused by species of the fungus Armillaria.  Common names for this group of fungi include the oak fungi, shoestring root rot fungi, or the honey fungi, the latter referring to the honey-colored mushrooms the fungus produces.  

Armillaria is a common soil inhabitant and can infect a very wide host range including; oaks, maples, azaleas, beeches, birches, boxwoods, cedars, dogwoods, firs, poplars, rhododendrons, yews, roses, spruces, and sycamores (pretty much any woody tree or shrub).  It can be destructive in orchards or on fruit trees in the landscape. 
Symptoms of Armillaria Root Rot (NCSU PDIC) 

Armillaria is typically a problem in older plants or plants that have been stressed due to drought, frost, insect attack, mechanical injuries, poor drainage, low soil fertility excessive shade, or pollution damage.  However, it can be an aggressive pathogen under some conditions.  Severe infections of young plants in nurseries can result in a quick death.  Older or mature plants can withstand infections for several years, resulting in a slow decline, eventually ending with the death of the plant.  

Above-ground symptoms include leaf drop, dieback, and an overall decline in plant vigor.  On conifers, the crowns of infected plants start to thin and change colors, often turning red, brown, or yellowish. Conifer infections sometimes result in heavy resin flow at the tree base.  
Armillaria Symptoms on Juniper (NCSU PDIC)

Armillaria infections start in young roots, but soon the fungus begins to decay larger woody roots. In the early stages of infection, wood becomes slightly grey and can have a water-soaked appearance.  Later, the wood becomes light yellow to white and has a soft, spongy rot.  Often, rotted areas are offset by black lines of zonation.  
Note the black lines of zonation (Photo: Bugwood)

Severely diseased trees can pose significant safety hazards during storms since branches and bases are weakened and can easily break under windy conditions or if under added pressure from snow or ice.  
Windthrow Hazard (Photo: Bugwood)

Unlike most plant pathogenic fungi, Armillaria produces mushrooms and other structures that are visible to the naked eye. Three diagnostic signs of Armillaria root rot include:

1.  Mycelial Fans: The most common diagnostic sign of this disease can be found beneath the bark (between the bark and the wood) at the base of the tree or shrub.  White or creamy paper-like mycelial fans can be observed when the outer bark is carefully peeled away.   These white mycelial fans can also be found beneath the bark of infected roots and root collar area. 
White Mycelial Fans (Photo: Bugwood)
White Mycelium Under Bark (E. Lookabaugh)

2.  Black Rhizomorphs: Sometimes rhizomorphs (dense strings of mycelium) that look like black shoestrings can be found under the bark or throughout the soil around infected tissue.  Rhizomorphs serve as one of the primary means of dissemination.  Rhizomorphs grow through the soil from infected trees, roots, or old stumps.  They are able to directly penetrate healthy roots and cause disease. 
Shoestring-like Rhizomorphs (Photo: Bugwood)

3.  Honey Mushrooms:  In the fall, honey-colored mushrooms can be seen growing near the base of diseased trees and shrubs.  Typically, these mushrooms grow in clusters.  These mushroom produce microscopic basidiospores, but the spores are not thought to play an important role in the spread of the disease. Most species of Armillaria are edible and are quite tasty.  Caution: It is always best to have any mushrooms identified by an expert before you eat them.  Eating misidentified mushrooms can be fatal! 
Honey Mushrooms (NCSU PP Slide Collection)

Control:

Usually homeowners do not notice Armillaria root rot until the plant is dead or dying. No control is possible at this point and the plant should be removed. 

Replanting can be problematic because Armillaria can survive for many years as rhizomorphs in soil or in old wood and stumps. Remove the affected plant and thoroughly dig up and remove all large roots, stumps and any other wood or prunings from the affected area. When planting in areas where a plant has died, or where trees have been removed, as in new construction, remove all old roots, stumps, and wood before replanting.  Consider planting ornamental herbaceous or perennial plants or grasses in the area for a few years before attempting to replant woody species.

Healthy trees and shrubs are better able to resist Armillaria root rot than stressed plants. Choose species that are well-adapted to your region and growing site. Maintain their health by fertilizing as recommended, watering during dry spells, and improving drainage in wet areas. When possible, prevent defoliation from insects and foliar diseases. Be careful to avoid damage to roots when digging or tilling. Do not push up soil around tree trunks and do not move soil from affected areas into sites where woody species are growing. 

Fun Facts:

This fungus glows in the dark! The mushrooms themselves do not glow much, mainly just the mycelium, giving infected/exposed wood an eerie glow at night.  Cutting open a piece of wood with advance decay gives you the greatest chance of seeing the luminescence.  Traditionally, glowing wood has been featured in folklore and mythology and termed “fairy fire” or “foxfire.” We do not know the exact reason why the mycelium glows, but we still think it makes this fungus pretty cool!
Glowing Mycelium (Photo: John Denk)

Back in the 1990’s, an article came out highlighting the ability of Armillaria bulbosa to form very large clones.  The ability of Armillaria to produce rhizomorphs, allows this fungus to spread out and become quite large, covering great geographic distances.  As a result, the phrase “humongous fungus” was born and the media took hold.
UHAUL "Humongous Fungus" (Photo: Tom Volk Website)
 Special Thanks to Dr. Larry Grand for Helping with this Post!

Monday, January 31, 2011

Problem Pythium?

Have you been having a problem with Pythium root rot at your facility? Do you think that you may have resistant isolates? If so, you can contact the Plant Disease and Insect Clinic (link below) for more information about sample submission procedures.  I am going to be actively sampling North Carolina greenhouses for Pythium isolates.  If you would like us to sample your greenhouse or test your plants for mefenoxam resistance we might be able to add your facility to our list.  Please contact the clinic for more information. 





  




Tuesday, January 25, 2011

A Little Bit About Pythium

About Pythium

Pythium species are  “water molds” that produce swimming spores called zoospores. There are many species of Pythium.   Some species are saprophytes or weak pathogens that mostly decay dead root tissue.  Often, Pythium nibbles on feeder roots of plants. Under the right environmental conditions, however, some Pythium species become destructive pathogens that rot and kill the roots of plants, resulting in stunted growth or death.  The pathogen is favored by wet conditions, such as when media does not drain properly or when weather events prevent the soil from drying out completely.  Pythium can also be more problematic when the host plants are stressed.

             Pythium can be a problem on many annual and perennial hosts and is extremely destructive to greenhouse production of poinsettias and geraniums. Pythium can be introduced into greenhouses on infected plugs or infected plant material.  It can also be a year-round “resident” hiding on dirty plant containers, equipment, benches, or even in irrigation water, waiting for the conditions that favor the pathogen and disease development. 

Leaf curling associated with Pythium root rot on poinsettia


Stunted growth symptom of Pythium root rot on poinsettia

Managing Pythium Problems

Sanitation is very important in managing root rot because Pythium produces survival structures, called chlamydospores, that are able to survive for long periods of time on infected plant material or dirty benches and pots.  There are some fungicides that are effective against Pythium and other water molds (oomycetes).  Some of the most popular oomycete fungicides contain the active ingredient mefenoxam.  In recent years, greenhouse growers have seen an increase in oomycete resistance to mefenoxam, resulting in poor disease control.  Some good practices that limit the occurrence of fungicide resistance include:

  • Time spray applications when the pathogen is weakest or most vulnerable to application
  • Use a fungicide registered for your pathogen that is proven to be effective in controlled settings
  • Alternate active ingredients in your spray programs
  • Use only the labeled rates listed on the container and do not over-apply the fungicide
  • Incorporate new fungicides into your spray program as they become available


Unfortunately, even when using good application practices, sometimes the pathogens still develop resistance. 

Research Goals

The purpose of my research is to determine which Pythium species are present in North Carolina greenhouses and to evaluate their abilities to be effective pathogens in the greenhouse environment.  This will involve morphological and molecular species characterization, pathogenicity assays, growth chamber studies, and checking for mefenoxam sensitivity.  

At the plant disease clinic, we routinely run root assays to determine the presence of Pythium.  Currently, we are not able to determine which species of Pythium is present and whether it is pathogenic or just saprophytic.  My research will allow the diagnosticians at the disease clinic the opportunity to expand their Pythium diagnosis to be more beneficial to the grower.  We will be able to tell the grower whether the Pythium we isolated from their plants is resistant to mefenoxam and if so, offer alternative control options.  

Fungicides are expensive.  Routine mefenoxam screening will help growers develop effective fungicide programs so they are not spraying money down the drain.